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  5. Solyc02g021290.1.1

Solyc02g021290.1.1


Description : Photosystem II protein D1 OS=Chlorella ellipsoidea (sp|p35860|psba_chlel : 84.3)


Gene families : OG0001158 (Archaeplastida) Phylogenetic Tree(s): OG0001158_tree ,
OG_05_0000799 (LandPlants) Phylogenetic Tree(s): OG_05_0000799_tree ,
OG_06_0000883 (SeedPlants) Phylogenetic Tree(s): OG_06_0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g021290.1.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270980 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 Archaeplastida
AMTR_s00071p00011330 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 Archaeplastida
AMTR_s00172p00027480 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.03 Archaeplastida
AMTR_s00172p00030370 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.03 Archaeplastida
AMTR_s00172p00038240 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.03 Archaeplastida
AMTR_s00172p00040120 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.03 Archaeplastida
AMTR_s00390p00002060 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 Archaeplastida
ATCG00020 PSBA photosystem II reaction center protein A 0.04 Archaeplastida
GSVIVT01016441001 No alias Photosystem II protein D1 OS=Vitis vinifera 0.04 Archaeplastida
Gb_03955 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.08 Archaeplastida
Gb_09035 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.07 Archaeplastida
Gb_18604 No alias Photosystem II protein D1 OS=Adiantum capillus-veneris... 0.07 Archaeplastida
Gb_20129 No alias Photosystem II protein D1 OS=Zygnema circumcarinatum... 0.04 Archaeplastida
Gb_26289 No alias no description available(sp|q85bh5|psba_antag : 489.0) 0.06 Archaeplastida
LOC_Os10g21192.1 No alias component PsbA/D1 of PS-II reaction center complex 0.05 Archaeplastida
LOC_Os10g39880.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
LOC_Os12g19580.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.05 Archaeplastida
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.05 Archaeplastida
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.05 Archaeplastida
Mp5g10950.1 No alias No annotation 0.04 Archaeplastida
Smo139195 No alias Photosystem II protein D1 OS=Phalaenopsis aphrodite... 0.05 Archaeplastida
Smo236852 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 Archaeplastida
Solyc00g500130.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.05 Archaeplastida
Solyc00g500200.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.05 Archaeplastida
Solyc00g500296.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.05 Archaeplastida
Solyc00g500329.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.05 Archaeplastida
Solyc05g016120.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e036844_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.06 Archaeplastida
Zm00001e042113_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.08 Archaeplastida
Zm00001e042176_P001 No alias component PsbA/D1 of PS-II reaction center complex 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!