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Description : no hits & (original description: none)
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0024313 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0023163 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc02g031960.3.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| AT1G14420 | AT59 | Pectate lyase family protein | 0.03 | Archaeplastida | |
| AT2G02720 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
| AT5G15110 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | Archaeplastida | |
| GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01024239001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| LOC_Os02g12300.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| LOC_Os06g05260.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_103716g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_10429028g0020 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_204440g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.02 | Archaeplastida | |
| Solyc02g087670.3.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| Solyc05g007080.4.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| Solyc09g061890.3.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Zm00001e024959_P001 | No alias | pectate lyase | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030570 | pectate lyase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
| BP | GO:0006020 | inositol metabolic process | IEP | Neighborhood |
| BP | GO:0006066 | alcohol metabolic process | IEP | Neighborhood |
| BP | GO:0019310 | inositol catabolic process | IEP | Neighborhood |
| BP | GO:0019751 | polyol metabolic process | IEP | Neighborhood |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Neighborhood |
| BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
| BP | GO:0046164 | alcohol catabolic process | IEP | Neighborhood |
| BP | GO:0046174 | polyol catabolic process | IEP | Neighborhood |
| MF | GO:0050113 | inositol oxygenase activity | IEP | Neighborhood |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007524 | Pec_lyase_N | 29 | 79 |
| No external refs found! |