Solyc02g063520.3.1

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000355 (Archaeplastida) Phylogenetic Tree(s): OG0000355_tree ,
OG_05_0000278 (LandPlants) Phylogenetic Tree(s): OG_05_0000278_tree ,
OG_06_0000297 (SeedPlants) Phylogenetic Tree(s): OG_06_0000297_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g063520.3.1
Cluster	HCCA: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00245530	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AT1G70920	HB18, ATHB18	homeobox-leucine zipper protein 18	0.05	Archaeplastida
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.04	Archaeplastida
Cpa\|evm.model.tig00000203.28	No alias	No description available	0.02	Archaeplastida
GSVIVT01009274001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
Gb_30650	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os06g04870.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os09g27450.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os10g01470.1	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
LOC_Os10g41230.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_12174g0010	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
MA_21460g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc01g073910.4.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc04g077220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc08g007270.4.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc10g080540.2.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e009939_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e013141_P001	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Zm00001e022765_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e038644_P001	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	113	167
IPR003106	Leu_zip_homeo	169	202

External Links

No external refs found!

Solyc02g063520.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation