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  5. Solyc02g065800.3.1

Solyc02g065800.3.1


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g065800.3.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.03 Archaeplastida
LOC_Os01g55750.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os05g43760.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e012216_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022442_P001 No alias transcription factor (TCP) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 45 130
No external refs found!