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  5. Solyc02g066900.3.1

Solyc02g066900.3.1


Description : No annotation


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g066900.3.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 Archaeplastida
LOC_Os03g30570.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Solyc01g058740.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g059780.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g030637.1.1 No alias No annotation 0.02 Archaeplastida
Solyc02g066855.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.12 Archaeplastida
Solyc02g150115.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!