1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g067330.1.1

Solyc02g067330.1.1


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067330.1.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.03 Archaeplastida
AT1G74660 MIF1 mini zinc finger 1 0.05 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.04 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.03 Archaeplastida
GSVIVT01011415001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_30985 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os03g50920.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os04g35500.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os09g24810.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_171206g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_173815g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_19630g0020 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_91212g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_97909g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.02 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 30 82
No external refs found!