Solyc02g070310.3.1

Description : component RPL32 of LSU proteome component

Gene families : OG0001950 (Archaeplastida) Phylogenetic Tree(s): OG0001950_tree ,
OG_05_0001887 (LandPlants) Phylogenetic Tree(s): OG_05_0001887_tree ,
OG_06_0002781 (SeedPlants) Phylogenetic Tree(s): OG_06_0002781_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g070310.3.1
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AT4G18100	No alias	Ribosomal protein L32e	0.24	Archaeplastida
AT5G46430	No alias	Ribosomal protein L32e	0.11	Archaeplastida
Cpa\|evm.model.tig00020554.140	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.3	Archaeplastida
Cre06.g289550	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.43	Archaeplastida
GSVIVT01005150001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.21	Archaeplastida
GSVIVT01021377001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.29	Archaeplastida
Gb_36437	No alias	component RPL32 of LSU proteome component	0.26	Archaeplastida
LOC_Os08g41300.1	No alias	component RPL32 of LSU proteome component	0.16	Archaeplastida
LOC_Os09g32500.1	No alias	component RPL32 of LSU proteome component	0.33	Archaeplastida
LOC_Os09g32520.1	No alias	component RPL32 of LSU proteome component	0.12	Archaeplastida
LOC_Os09g32532.1	No alias	component RPL32 of LSU proteome component	0.09	Archaeplastida
MA_10434621g0010	No alias	component RPL32 of LSU proteome component	0.09	Archaeplastida
MA_41569g0010	No alias	component RPL32 of LSU proteome component	0.2	Archaeplastida
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.31	Archaeplastida
Pp3c14_10580V3.1	No alias	Ribosomal protein L32e	0.26	Archaeplastida
Pp3c17_13590V3.1	No alias	Ribosomal protein L32e	0.22	Archaeplastida
Pp3c1_32490V3.1	No alias	Ribosomal protein L32e	0.33	Archaeplastida
Pp3c2_9590V3.1	No alias	Ribosomal protein L32e	0.32	Archaeplastida
Smo146656	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.15	Archaeplastida
Solyc02g150130.1.1	No alias	component RPL32 of LSU proteome component	0.05	Archaeplastida
Zm00001e003623_P002	No alias	component RPL32 of LSU proteome component	0.07	Archaeplastida
Zm00001e010105_P002	No alias	component RPL32 of LSU proteome component	0.06	Archaeplastida
Zm00001e021938_P001	No alias	component RPL32 of LSU proteome component	0.3	Archaeplastida
Zm00001e034604_P001	No alias	component RPL32 of LSU proteome component	0.11	Archaeplastida
Zm00001e034606_P001	No alias	component RPL32 of LSU proteome component	0.32	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000313	organellar ribosome	IEP	Neighborhood
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
CC	GO:0005761	mitochondrial ribosome	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
CC	GO:0098798	mitochondrial protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	16	122

External Links

No external refs found!

Solyc02g070310.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation