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  5. Solyc02g071510.3.1

Solyc02g071510.3.1


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree ,
OG_06_0000655 (SeedPlants) Phylogenetic Tree(s): OG_06_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g071510.3.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
Zm00001e021805_P005 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Zm00001e029260_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR027353 NET_dom 233 295
IPR001487 Bromodomain 90 173
No external refs found!