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  5. Solyc02g077280.4.1

Solyc02g077280.4.1


Description : GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana (sp|q8vz74|era_arath : 510.0)


Gene families : OG0006586 (Archaeplastida) Phylogenetic Tree(s): OG0006586_tree ,
OG_05_0008248 (LandPlants) Phylogenetic Tree(s): OG_05_0008248_tree ,
OG_06_0009452 (SeedPlants) Phylogenetic Tree(s): OG_06_0009452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077280.4.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AT5G66470 No alias RNA binding;GTP binding 0.09 Archaeplastida
GSVIVT01018924001 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.12 Archaeplastida
Gb_05092 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os05g49220.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.08 Archaeplastida
MA_124092g0010 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.03 Archaeplastida
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.08 Archaeplastida
Pp3c26_7390V3.1 No alias RNA binding;GTP binding 0.09 Archaeplastida
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.05 Archaeplastida
Zm00001e026555_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 343 420
IPR006073 GTP_binding_domain 143 260
No external refs found!