Solyc02g078020.3.1


Description : Protein SMG7L OS=Arabidopsis thaliana (sp|q9fz99|smg7l_arath : 524.0)


Gene families : OG0002555 (Archaeplastida) Phylogenetic Tree(s): OG0002555_tree ,
OG_05_0002119 (LandPlants) Phylogenetic Tree(s): OG_05_0002119_tree ,
OG_06_0012838 (SeedPlants) Phylogenetic Tree(s): OG_06_0012838_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078020.3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT1G28260 No alias Telomerase activating protein Est1 0.03 Archaeplastida
GSVIVT01007284001 No alias Protein SMG7L OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_32124 No alias Protein SMG7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g21350.1 No alias SMG7 Nonsense-Mediated mRNA Decay protein 0.04 Archaeplastida
MA_32980g0010 No alias Protein SMG7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009613_P002 No alias SMG7 Nonsense-Mediated mRNA Decay protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019458 EST1 70 187
IPR018834 DNA/RNA-bd_Est1-type 199 514
No external refs found!