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  5. Solyc02g078380.3.1

Solyc02g078380.3.1


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 251.0)


Gene families : OG0000604 (Archaeplastida) Phylogenetic Tree(s): OG0000604_tree ,
OG_05_0001003 (LandPlants) Phylogenetic Tree(s): OG_05_0001003_tree ,
OG_06_0004247 (SeedPlants) Phylogenetic Tree(s): OG_06_0004247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078380.3.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00066790 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01017899001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 Archaeplastida
LOC_Os12g05050.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_3443g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
Solyc06g054370.2.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e041947_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR024286 DUF3700 2 228
No external refs found!