Solyc02g078620.1.1

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0085476 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g078620.1.1
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.05	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
GSVIVT01005057001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01016538001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01038591001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.07	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.02	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.03	Archaeplastida
Gb_28499	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os04g58190.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os07g13260.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os07g48570.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os10g26620.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os10g35300.2	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_459791g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_7537g0010	No alias	transcription factor (DOF)	0.04	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.04	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e000526_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e001988_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e003086_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e004476_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e005107_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e012824_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e028672_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e034454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
BP	GO:0015977	carbon fixation	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	42	95

External Links

No external refs found!

Solyc02g078620.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation