Solyc02g079450.1.1

Description : Berberine bridge enzyme-like 23 OS=Arabidopsis thaliana (sp|q9fkv2|bbe23_arath : 479.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 448.6)

Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g079450.1.1
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AT1G26380	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT1G26420	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT1G30700	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
AT1G30720	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT4G20860	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT5G44360	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
AT5G44390	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
GSVIVT01021723001	No alias	Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_24405	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os02g14090.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
LOC_Os06g35560.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os06g35590.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
LOC_Os06g35700.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os11g30310.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
MA_10428737g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Solyc02g070170.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Solyc09g072660.4.1	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Zm00001e014361_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e030681_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e040211_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005048	signal sequence binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006621	protein retention in ER lumen	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0032507	maintenance of protein location in cell	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Neighborhood
MF	GO:0042277	peptide binding	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045185	maintenance of protein location	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0046923	ER retention sequence binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0051235	maintenance of location	IEP	Neighborhood
BP	GO:0051259	protein complex oligomerization	IEP	Neighborhood
BP	GO:0051260	protein homooligomerization	IEP	Neighborhood
BP	GO:0051651	maintenance of location in cell	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	70	207
IPR012951	BBE	475	530

External Links

No external refs found!

Solyc02g079450.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation