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  5. Solyc02g079920.3.1

Solyc02g079920.3.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000798 (Archaeplastida) Phylogenetic Tree(s): OG0000798_tree ,
OG_05_0000584 (LandPlants) Phylogenetic Tree(s): OG_05_0000584_tree ,
OG_06_0004434 (SeedPlants) Phylogenetic Tree(s): OG_06_0004434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079920.3.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT5G54630 No alias zinc finger protein-related 0.05 Archaeplastida
Gb_25842 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_32332 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g15790.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_103943g0010 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_13576g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Mp3g21490.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c23_13220V3.1 No alias zinc finger protein-related 0.02 Archaeplastida
Pp3c24_2500V3.1 No alias zinc finger protein-related 0.02 Archaeplastida
Smo236040 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 Archaeplastida
Zm00001e008786_P002 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!