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  5. Solyc02g082390.1.1

Solyc02g082390.1.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0034802 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0031620 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g082390.1.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G19000 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G21650 ATRL2, MEE3, RSM1 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.07 Archaeplastida
AT4G09450 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01009716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013684001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g51160.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os06g07640.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_908g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Pp3c15_23090V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Solyc02g082375.1.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Solyc04g150172.1.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc09g007580.3.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc12g089170.3.1 No alias transcription factor (MYB-related) 0.12 Archaeplastida
Zm00001e010716_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027520_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e036372_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e040398_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e040399_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 162
No external refs found!