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  5. Solyc02g084510.3.1

Solyc02g084510.3.1


Description : Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana (sp|q9sd34|c3h44_arath : 518.0)


Gene families : OG0000906 (Archaeplastida) Phylogenetic Tree(s): OG0000906_tree ,
OG_05_0000582 (LandPlants) Phylogenetic Tree(s): OG_05_0000582_tree ,
OG_06_0001941 (SeedPlants) Phylogenetic Tree(s): OG_06_0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g084510.3.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00244500 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 19... 0.03 Archaeplastida
AT3G51120 No alias DNA binding;zinc ion binding;nucleic acid... 0.05 Archaeplastida
GSVIVT01018827001 No alias Zinc finger CCCH domain-containing protein 19... 0.03 Archaeplastida
Gb_13134 No alias Zinc finger CCCH domain-containing protein 44... 0.03 Archaeplastida
LOC_Os09g36090.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.03 Archaeplastida
LOC_Os10g36810.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.04 Archaeplastida
MA_116694g0010 No alias Zinc finger CCCH domain-containing protein 19... 0.02 Archaeplastida
MA_12806g0020 No alias protein factor (NERD) of non-canonical RdDM pathway 0.05 Archaeplastida
Pp3c15_12580V3.1 No alias DNA binding;zinc ion binding;nucleic acid... 0.02 Archaeplastida
Pp3c15_12700V3.1 No alias nucleic acid binding;zinc ion binding;DNA binding 0.02 Archaeplastida
Zm00001e000091_P002 No alias protein factor (NERD) of non-canonical RdDM pathway 0.1 Archaeplastida
Zm00001e012555_P003 No alias protein factor (NERD) of non-canonical RdDM pathway 0.04 Archaeplastida
Zm00001e019791_P001 No alias protein factor (NERD) of non-canonical RdDM pathway 0.08 Archaeplastida
Zm00001e027036_P001 No alias Zinc finger CCCH domain-containing protein 19... 0.02 Archaeplastida
Zm00001e029059_P002 No alias protein factor (NERD) of non-canonical RdDM pathway 0.07 Archaeplastida
Zm00001e039077_P001 No alias protein factor (NERD) of non-canonical RdDM pathway 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004343 Plus-3_dom 494 597
IPR003121 SWIB_MDM2_domain 358 431
No external refs found!