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  4. Sequence
  5. Solyc02g085160.1.1

Solyc02g085160.1.1


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085160.1.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00085480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AMTR_s00070p00154800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.04 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.05 Archaeplastida
AT2G02540 ZHD3, HB21, ATHB21, ZFHD4 homeobox protein 21 0.07 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.03 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.06 Archaeplastida
AT4G24660 ATHB22, MEE68, ZHD2, HB22 homeobox protein 22 0.03 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.07 Archaeplastida
AT5G60480 HB26, ZHD12, AtHB26 homeobox protein 26 0.03 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.04 Archaeplastida
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01023137001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_37393 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Gb_39720 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os02g47770.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os03g50920.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os04g35500.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os08g34010.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
LOC_Os11g03420.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os11g13930.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os12g10630.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_101972g0010 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Mp8g08190.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Pp3c19_20410V3.1 No alias homeobox protein 21 0.03 Archaeplastida
Pp3c1_15290V3.1 No alias homeobox protein 33 0.04 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Solyc02g067330.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e018364_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 90 142
No external refs found!