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  5. Solyc02g085580.4.1

Solyc02g085580.4.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085580.4.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT5G66730 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
GSVIVT01003119001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_17209 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os02g45054.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.02 Archaeplastida
LOC_Os07g39310.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os09g27650.2 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
MA_10430137g0020 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 22 44
No external refs found!