AMTR_s00023p00086020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.41

Description : Patellin-6 OS=Arabidopsis thaliana


Gene families : OG0000809 (Archaeplastida) Phylogenetic Tree(s): OG0000809_tree ,
OG_05_0000939 (LandPlants) Phylogenetic Tree(s): OG_05_0000939_tree ,
OG_06_0008933 (SeedPlants) Phylogenetic Tree(s): OG_06_0008933_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00086020
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 Archaeplastida
AT3G51670 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.06 Archaeplastida
AT4G09160 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.04 Archaeplastida
GSVIVT01021727001 No alias Patellin-4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030264001 No alias Patellin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_20479 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g65380.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g27820.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os05g35460.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g45990.2 No alias Patellin-4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_7082827g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070210.3.1 No alias Patellin-4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g064940.3.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc09g015080.3.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e019109_P003 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026912_P001 No alias Patellin-6 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e031502_P004 No alias Patellin-6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e031729_P005 No alias Patellin-5 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 144 305
IPR011074 CRAL/TRIO_N_dom 56 123
No external refs found!