1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g088710.3.1

Solyc02g088710.3.1


Description : acyl-CoA synthetase (ACS5)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0007213 (LandPlants) Phylogenetic Tree(s): OG_05_0007213_tree ,
OG_06_0008939 (SeedPlants) Phylogenetic Tree(s): OG_06_0008939_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088710.3.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00136980 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00025p00217510 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.11 Archaeplastida
AMTR_s00025p00217630 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.11 Archaeplastida
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.04 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.04 Archaeplastida
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.18 Archaeplastida
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.02 Archaeplastida
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.03 Archaeplastida
GSVIVT01010497001 No alias Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.11 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.04 Archaeplastida
GSVIVT01029182001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
Gb_19726 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_40571 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Gb_40573 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.01 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os03g04000.1 No alias OPC-8:CoA synthetase 0.05 Archaeplastida
LOC_Os04g24530.1 No alias acyl-CoA synthetase (ACS5) 0.17 Archaeplastida
LOC_Os08g14760.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_608525g0010 No alias No annotation 0.03 Archaeplastida
MA_633407g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_70509g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
MA_8946476g0010 No alias acyl-CoA synthetase (ACS5) 0.05 Archaeplastida
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Pp3c13_8490V3.1 No alias AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
Pp3c18_6360V3.1 No alias 4-coumarate:CoA ligase 3 0.05 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c3_24370V3.1 No alias AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
Pp3c3_37980V3.1 No alias acyl-CoA synthetase 5 0.03 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo181279 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo232017 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
Solyc06g068650.4.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Zm00001e008138_P001 No alias acyl-CoA synthetase (ACS5) 0.09 Archaeplastida
Zm00001e013798_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Zm00001e016374_P001 No alias acyl-CoA synthetase (ACS5) 0.1 Archaeplastida
Zm00001e023286_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 460 535
IPR000873 AMP-dep_Synth/Lig 41 451
No external refs found!