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  5. Solyc02g089640.3.1

Solyc02g089640.3.1


Description : 1,4-beta-glucan synthase (CSLC)


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree ,
OG_06_0000676 (SeedPlants) Phylogenetic Tree(s): OG_06_0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g089640.3.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00054150 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.02 Archaeplastida
AMTR_s00072p00194730 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 Archaeplastida
AT1G23480 ATCSLA3, CSLA03,... cellulose synthase-like A3 0.04 Archaeplastida
AT3G28180 ATCSLC04,... Cellulose-synthase-like C4 0.06 Archaeplastida
AT3G56000 ATCSLA14, CSLA14 cellulose synthase like A14 0.04 Archaeplastida
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.04 Archaeplastida
AT4G16590 ATCSLA1, ATCSLA01, CSLA01 cellulose synthase-like A01 0.03 Archaeplastida
AT4G31590 ATCSLC05,... Cellulose-synthase-like C5 0.03 Archaeplastida
AT5G16190 CSLA11, ATCSLA11 cellulose synthase like A11 0.03 Archaeplastida
GSVIVT01009290001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.05 Archaeplastida
GSVIVT01016135001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
GSVIVT01033168001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.05 Archaeplastida
GSVIVT01033767001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 Archaeplastida
GSVIVT01034719001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 Archaeplastida
Gb_21966 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Gb_24488 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Gb_27616 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
Gb_28041 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.02 Archaeplastida
Gb_29144 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_35783 No alias 1,4-beta-glucan synthase (CSLC) 0.11 Archaeplastida
LOC_Os02g09930.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
LOC_Os05g43530.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os09g25900.1 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
MA_10431741g0020 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
MA_10432355g0010 No alias Probable xyloglucan glycosyltransferase 3 OS=Oryza... 0.05 Archaeplastida
MA_712121g0010 No alias Probable xyloglucan glycosyltransferase 9 OS=Oryza... 0.04 Archaeplastida
MA_9381137g0010 No alias Probable xyloglucan glycosyltransferase 2 OS=Oryza... 0.02 Archaeplastida
Mp1g22770.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Pp3c14_12270V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c14_13750V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.06 Archaeplastida
Pp3c15_20570V3.1 No alias Glycosyl transferase family 2 protein 0.03 Archaeplastida
Pp3c17_19630V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.06 Archaeplastida
Pp3c18_10540V3.1 No alias Cellulose-synthase-like C5 0.02 Archaeplastida
Pp3c22_1440V3.1 No alias Cellulose-synthase-like C5 0.02 Archaeplastida
Pp3c27_7220V3.1 No alias Cellulose-synthase-like C5 0.03 Archaeplastida
Solyc06g074630.4.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Solyc09g009010.4.1 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.05 Archaeplastida
Zm00001e020029_P001 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e021557_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Zm00001e022456_P001 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e032112_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.08 Archaeplastida
Zm00001e039906_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 284 478
No external refs found!