Solyc02g090820.3.1

Description : transcription factor (HSF)

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g090820.3.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00262410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AMTR_s00048p00075850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00069p00068180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00176p00025440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.03	Archaeplastida
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.09	Archaeplastida
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.03	Archaeplastida
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	Archaeplastida
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.02	Archaeplastida
Cre07.g354500	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01011632001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01022134001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
Gb_14573	No alias	transcription factor (HSF)	0.04	Archaeplastida
LOC_Os03g12370.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os09g28354.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Mp4g12230.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Pp3c11_20430V3.1	No alias	heat shock transcription factor A1E	0.04	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.02	Archaeplastida
Pp3c1_32480V3.1	No alias	heat shock factor 3	0.04	Archaeplastida
Smo92634	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Smo93081	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
Solyc04g016000.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e011633_P001	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	Archaeplastida
Zm00001e014583_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e019898_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e029052_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e037165_P002	No alias	transcription factor (HSF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0007034	vacuolar transport	IEP	Neighborhood
BP	GO:0016197	endosomal transport	IEP	Neighborhood
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Neighborhood
CC	GO:0036452	ESCRT complex	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044440	endosomal part	IEP	Neighborhood
BP	GO:0071985	multivesicular body sorting pathway	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	10	99

External Links

No external refs found!

Solyc02g090820.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation