Solyc02g092070.3.1

Description : component GRF of GRF-GIF transcriptional complex

Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree ,
OG_06_0005277 (SeedPlants) Phylogenetic Tree(s): OG_06_0005277_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g092070.3.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT4G24150	AtGRF8, GRF8	growth-regulating factor 8	0.08	Archaeplastida
GSVIVT01019913001	No alias	RNA biosynthesis.transcriptional activation.GRF-GIF...	0.03	Archaeplastida
LOC_Os02g47280.1	No alias	component GRF of GRF-GIF transcriptional complex	0.04	Archaeplastida
LOC_Os02g53690.1	No alias	component GRF of GRF-GIF transcriptional complex	0.04	Archaeplastida
LOC_Os03g47140.1	No alias	component GRF of GRF-GIF transcriptional complex	0.04	Archaeplastida
LOC_Os04g48510.1	No alias	component GRF of GRF-GIF transcriptional complex	0.02	Archaeplastida
LOC_Os04g51190.1	No alias	component GRF of GRF-GIF transcriptional complex	0.04	Archaeplastida
LOC_Os06g02560.1	No alias	component GRF of GRF-GIF transcriptional complex	0.07	Archaeplastida
Solyc01g091540.3.1	No alias	component GRF of GRF-GIF transcriptional complex	0.03	Archaeplastida
Solyc08g005430.3.1	No alias	component GRF of GRF-GIF transcriptional complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR014978	Gln-Leu-Gln_QLQ	140	173
IPR014977	WRC_dom	210	252

External Links

No external refs found!

Solyc02g092070.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation