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  5. Solyc02g092930.1.1

Solyc02g092930.1.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g092930.1.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.04 Archaeplastida
AT3G30210 MYB121, ATMYB121 myb domain protein 121 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.1 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.03 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.05 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.12 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.03 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.07 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.03 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.1 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000219001 No alias No description available 0.06 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007670001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009424001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01012777001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029941001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_35539 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_39081 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_39484 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.13 Archaeplastida
LOC_Os06g46560.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139238g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_179894g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_80033g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_97537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp4g21790.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.03 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c24_11770V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c5_2150V3.1 No alias myb domain protein 109 0.06 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.05 Archaeplastida
Pp3c8_16720V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004114_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018471_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e033519_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 59 100
IPR001005 SANT/Myb 5 50
No external refs found!