Solyc03g005500.1.1

Description : transcription factor (ERF). transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g005500.1.1
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00026p00180130	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF084...	0.02	Archaeplastida
AMTR_s00057p00191330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.05	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G12890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22810	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.03	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G25820	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.06	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17490	ERF-6-6, ERF6, ATERF6	ethylene responsive element binding factor 6	0.05	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.03	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01005747001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013931001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013934001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036201001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036389001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26667	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29168	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_36992	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g07120.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g21120.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
LOC_Os02g32040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os04g55520.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g11860.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os07g47790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.04	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os09g28440.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_100577g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_10431882g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10432141g0020	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
MA_10432800g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10491g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_15000g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_2446g0010	No alias	Ethylene-responsive transcription factor ERF053...	0.02	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9565555g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Pp3c10_7030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c14_3280V3.1	No alias	cytokinin response factor 2	0.03	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c3_31500V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c3_33930V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_23930V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Smo409196	No alias	External stimuli response.biotic...	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.04	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g008305.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc10g050970.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e030090_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e037241_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004107	chorismate synthase activity	IEP	Neighborhood
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006570	tyrosine metabolic process	IEP	Neighborhood
BP	GO:0006571	tyrosine biosynthetic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	5	57

External Links

No external refs found!

Solyc03g005500.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation