Solyc03g005520.1.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g005520.1.1
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00003p00135920	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00098700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00099690	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF110...	0.02	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00069p00141520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G25820	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.03	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.05	Archaeplastida
AT4G06746	RAP2.9, DEAR5	related to AP2 9	0.03	Archaeplastida
AT4G17490	ERF-6-6, ERF6, ATERF6	ethylene responsive element binding factor 6	0.07	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.05	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013935001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.08	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.06	Archaeplastida
GSVIVT01020584001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01021098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.08	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01035502001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.09	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036389001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_00745	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08031	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.03	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26067	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_40290	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g46870.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os09g13940.2	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os09g28440.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_100577g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_100724g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10343854g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10434101g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10434489g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10436654g0010	No alias	Ethylene-responsive transcription factor ERF018...	0.04	Archaeplastida
MA_108992g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_12171g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_214532g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_23271g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_288689g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_4072g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_420358g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_426919g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_426919g0030	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_45733g0020	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_463250g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5280013g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_5306433g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.05	Archaeplastida
MA_55226g0020	No alias	Ethylene-responsive transcription factor ERF016...	0.04	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_7166g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_7168929g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_81979g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_82481g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_914123g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_924346g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.08	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g17020.1	No alias	Dehydration-responsive element-binding protein 2C...	0.02	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c14_9940V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g124110.2.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.04	Archaeplastida
Solyc04g012050.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc06g054630.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g082590.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc07g053740.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g007820.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g007830.1.1	No alias	Dehydration-responsive element-binding protein 1F...	0.03	Archaeplastida
Solyc09g089920.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050970.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006604_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e015312_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.02	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e036201_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e038888_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	62	112

External Links

No external refs found!

Solyc03g005520.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation