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  5. AMTR_s00023p00192080

AMTR_s00023p00192080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.131

Description : Chitinase 1 OS=Tulipa bakeri


Gene families : OG0002235 (Archaeplastida) Phylogenetic Tree(s): OG0002235_tree ,
OG_05_0001523 (LandPlants) Phylogenetic Tree(s): OG_05_0001523_tree ,
OG_06_0001626 (SeedPlants) Phylogenetic Tree(s): OG_06_0001626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00192080
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.02 Archaeplastida
Gb_07285 No alias no description available(sp|q7m443|chit2_tulsb : 215.0) 0.04 Archaeplastida
Gb_07286 No alias no description available(sp|q9slp4|chit1_tulsb : 171.0) 0.03 Archaeplastida
LOC_Os10g28050.1 No alias no description available(sp|q7m443|chit2_tulsb : 285.0) 0.04 Archaeplastida
LOC_Os10g28080.1 No alias no description available(sp|q9slp4|chit1_tulsb : 266.0) 0.03 Archaeplastida
Solyc11g072760.1.1 No alias no description available(sp|q7m443|chit2_tulsb : 364.0) 0.07 Archaeplastida
Solyc11g072830.1.1 No alias no description available(sp|q7m443|chit2_tulsb : 343.0) 0.02 Archaeplastida
Zm00001e004770_P001 No alias no description available(sp|q7m443|chit2_tulsb : 315.0) 0.02 Archaeplastida
Zm00001e015464_P001 No alias no description available(sp|q7m443|chit2_tulsb : 269.0) 0.06 Archaeplastida
Zm00001e021310_P001 No alias no description available(sp|q7m443|chit2_tulsb : 281.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 51 212
No external refs found!