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  5. Solyc03g006540.3.1

Solyc03g006540.3.1


Description : no hits & (original description: none)


Gene families : OG0009112 (Archaeplastida) Phylogenetic Tree(s): OG0009112_tree ,
OG_05_0009705 (LandPlants) Phylogenetic Tree(s): OG_05_0009705_tree ,
OG_06_0011539 (SeedPlants) Phylogenetic Tree(s): OG_06_0011539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g006540.3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00047500 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
GSVIVT01011651001 No alias No description available 0.04 Archaeplastida
Zm00001e012176_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!