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  5. Solyc03g007860.1.1

Solyc03g007860.1.1


Description : PAM68 protein involved in PS-II assembly


Gene families : OG0004385 (Archaeplastida) Phylogenetic Tree(s): OG0004385_tree ,
OG_05_0004567 (LandPlants) Phylogenetic Tree(s): OG_05_0004567_tree ,
OG_06_0004117 (SeedPlants) Phylogenetic Tree(s): OG_06_0004117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g007860.1.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00088520 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
AT5G52780 No alias Protein of unknown function (DUF3464) 0.05 Archaeplastida
GSVIVT01018633001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
GSVIVT01028843001 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
LOC_Os06g21530.1 No alias PAM68 protein involved in PS-II assembly 0.05 Archaeplastida
LOC_Os10g38910.1 No alias PAM68 protein involved in PS-II assembly 0.06 Archaeplastida
Mp1g02230.1 No alias PAM68 protein involved in PS-II assembly 0.02 Archaeplastida
Pp3c21_19650V3.1 No alias Protein of unknown function (DUF3464) 0.02 Archaeplastida
Zm00001e039016_P001 No alias PAM68 protein involved in PS-II assembly 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0004359 glutaminase activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0042816 vitamin B6 metabolic process IEP Neighborhood
BP GO:0042819 vitamin B6 biosynthetic process IEP Neighborhood
BP GO:0042822 pyridoxal phosphate metabolic process IEP Neighborhood
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046184 aldehyde biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021855 PAM68-like 60 171
No external refs found!