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  5. Solyc03g013620.1.1

Solyc03g013620.1.1


Description : NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum lycopersicum (sp|q32516|nu5c_sollc : 253.0)


Gene families : OG0001390 (Archaeplastida) Phylogenetic Tree(s): OG0001390_tree ,
OG_05_0001018 (LandPlants) Phylogenetic Tree(s): OG_05_0001018_tree ,
OG_06_0000769 (SeedPlants) Phylogenetic Tree(s): OG_06_0000769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g013620.1.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
ATCG01010 NDHF NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein 0.05 Archaeplastida
Gb_27036 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_31814 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.11 Archaeplastida
Gb_31815 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.03 Archaeplastida
LOC_Os10g21418.1 No alias component NdhF of NDH membrane subcomplex M 0.07 Archaeplastida
Mp2g07160.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia... 0.02 Archaeplastida
Mp5g04270.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc00g500098.1.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Triticum... 0.06 Archaeplastida
Solyc00g500195.1.1 No alias component NdhF of NDH membrane subcomplex M 0.05 Archaeplastida
Solyc00g500271.1.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Triticum... 0.06 Archaeplastida
Solyc00g500317.1.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Triticum... 0.07 Archaeplastida
Solyc02g011720.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.05 Archaeplastida
Solyc11g021190.2.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001516 Proton_antipo_N 72 129
No external refs found!