AMTR_s00023p00221340 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.165

Description : Multi-process regulation.circadian clock.PRR time-of-day-dependent expressed repressor

Gene families : OG0000168 (Archaeplastida) Phylogenetic Tree(s): OG0000168_tree ,
OG_05_0000079 (LandPlants) Phylogenetic Tree(s): OG_05_0000079_tree ,
OG_06_0003030 (SeedPlants) Phylogenetic Tree(s): OG_06_0003030_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00023p00221340
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00125630	evm_27.TU.AmTr_v1...	Phytohormones.cytokinin.perception and signal...	0.04	Archaeplastida
AT1G74890	ARR15	response regulator 15	0.03	Archaeplastida
AT3G56380	ARR17, RR17	response regulator 17	0.02	Archaeplastida
AT5G60100	PRR3, APRR3	pseudo-response regulator 3	0.03	Archaeplastida
GSVIVT01020146001	No alias	Phytohormones.cytokinin.perception and signal...	0.03	Archaeplastida
GSVIVT01025087001	No alias	Two-component response regulator-like APRR7...	0.07	Archaeplastida
GSVIVT01025088001	No alias	Multi-process regulation.circadian clock.PRR...	0.04	Archaeplastida
GSVIVT01032644001	No alias	Multi-process regulation.circadian clock.PRR...	0.02	Archaeplastida
GSVIVT01038647001	No alias	Multi-process regulation.circadian clock.PRR...	0.03	Archaeplastida
LOC_Os02g58350.1	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
LOC_Os08g26990.1	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
LOC_Os08g28950.1	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
LOC_Os09g36220.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.04	Archaeplastida
MA_132682g0010	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
Mp2g16560.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.04	Archaeplastida
Mp3g03810.1	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
Solyc03g081240.3.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.06	Archaeplastida
Solyc04g049680.2.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc10g086000.3.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.07	Archaeplastida
Zm00001e007550_P001	No alias	A-type cytokinin ARR response negative regulator	0.04	Archaeplastida
Zm00001e010231_P002	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.07	Archaeplastida
Zm00001e034804_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008175	tRNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	730	773
IPR001789	Sig_transdc_resp-reg_receiver	101	212

External Links

No external refs found!

AMTR_s00023p00221340 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation