Solyc03g026270.3.1

Description : transcription factor (DREB). transcription factor (CBF/DREB1)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001453 (SeedPlants) Phylogenetic Tree(s): OG_06_0001453_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g026270.3.1
Cluster	HCCA: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
AMTR_s00003p00135920	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00098700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00099690	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF110...	0.04	Archaeplastida
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00069p00141520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
AMTR_s00099p00039760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G19210	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G22810	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.04	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.04	Archaeplastida
AT1G74930	ORA47	Integrase-type DNA-binding superfamily protein	0.1	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.04	Archaeplastida
AT3G50260	DEAR1, CEJ1, ATERF#011	cooperatively regulated by ethylene and jasmonate 1	0.04	Archaeplastida
AT4G17490	ERF-6-6, ERF6, ATERF6	ethylene responsive element binding factor 6	0.04	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.04	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01010629001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013905001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013913001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013916001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.04	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.05	Archaeplastida
GSVIVT01035502001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_01211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_24321	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_24326	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24329	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_32532	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_39497	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g58420.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.07	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os04g48350.1	No alias	Dehydration-responsive element-binding protein 1E...	0.04	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_100577g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10343854g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_10430850g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10491g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_34724g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_364562g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_420358g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_45733g0020	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_484878g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5280013g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5629699g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_66742g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_912855g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_914123g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c5_4370V3.1	No alias	No annotation	0.02	Archaeplastida
Solyc01g057080.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc12g056430.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006604_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.05	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.06	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.05	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e028920_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e036201_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.04	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.05	Archaeplastida
Zm00001e040124_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	49	99

External Links

No external refs found!

Solyc03g026270.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation