1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00023p00231760

AMTR_s00023p00231760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.188

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0006263 (Archaeplastida) Phylogenetic Tree(s): OG0006263_tree ,
OG_05_0007634 (LandPlants) Phylogenetic Tree(s): OG_05_0007634_tree ,
OG_06_0009343 (SeedPlants) Phylogenetic Tree(s): OG_06_0009343_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00231760
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Zm00001e019376_P001 No alias C3H zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Neighborhood
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018202 peptidyl-histidine modification IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Neighborhood
BP GO:2000765 regulation of cytoplasmic translation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!