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  5. Solyc03g044300.3.1

Solyc03g044300.3.1


Description : transcription factor (AP2)


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g044300.3.1
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00058p00216470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AMTR_s00101p00022740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G16060 ADAP ARIA-interacting double AP2 domain protein 0.02 Archaeplastida
AT1G72570 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.03 Archaeplastida
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G54990 SMZ Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G36920 AP2, FLO2, FL1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G10510 PLT3, AIL6 AINTEGUMENTA-like 6 0.03 Archaeplastida
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G57390 AIL5, EMK, CHO1 AINTEGUMENTA-like 5 0.03 Archaeplastida
AT5G67180 TOE3 target of early activation tagged (EAT) 3 0.03 Archaeplastida
Cpa|evm.model.tig00020710.12 No alias No description available 0.01 Archaeplastida
Cre08.g385350 No alias No description available 0.02 Archaeplastida
Cre10.g441300 No alias AP2-like ethylene-responsive transcription factor ANT... 0.01 Archaeplastida
GSVIVT01016097001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01016352001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Gb_18139 No alias transcription factor (AP2) 0.03 Archaeplastida
Gb_29561 No alias transcription factor (AP2) 0.03 Archaeplastida
Gb_33988 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os01g59780.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os01g67410.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os02g40070.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os03g07940.1 No alias transcription factor (AP2) 0.05 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.02 Archaeplastida
LOC_Os03g19900.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os03g56050.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os06g05340.1 No alias transcription factor (AP2). RAM1-dependent transcription... 0.02 Archaeplastida
LOC_Os06g43220.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os06g44750.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os08g34360.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os11g19060.1 No alias transcription factor (AP2) 0.05 Archaeplastida
MA_113625g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_2193g0020 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_86195g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
Mp7g13270.1 No alias transcription factor (AP2) 0.06 Archaeplastida
Pp3c12_12460V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c23_13360V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc09g007260.4.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc11g008560.2.1 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e015104_P001 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e018951_P001 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e024044_P002 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e027593_P003 No alias transcription factor (AP2) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003852 2-isopropylmalate synthase activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006551 leucine metabolic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009098 leucine biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 228 278
IPR001471 AP2/ERF_dom 136 185
No external refs found!