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  5. Solyc03g058470.3.1

Solyc03g058470.3.1


Description : RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0001337 (Archaeplastida) Phylogenetic Tree(s): OG0001337_tree ,
OG_05_0006705 (LandPlants) Phylogenetic Tree(s): OG_05_0006705_tree ,
OG_06_0005514 (SeedPlants) Phylogenetic Tree(s): OG_06_0005514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g058470.3.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00146980 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
GSVIVT01004096001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 Archaeplastida
Zm00001e010495_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 253 401
No external refs found!