Solyc03g082550.3.1

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g082550.3.1
Cluster	HCCA: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00010p00253290	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AMTR_s00040p00235500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AT1G27045	No alias	Homeobox-leucine zipper protein family	0.04	Archaeplastida
AT1G69780	ATHB13	Homeobox-leucine zipper protein family	0.04	Archaeplastida
AT2G22430	HB6, ATHB6	homeobox protein 6	0.05	Archaeplastida
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.04	Archaeplastida
AT3G01220	ATHB20, HB20	homeobox protein 20	0.04	Archaeplastida
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.03	Archaeplastida
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.03	Archaeplastida
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.04	Archaeplastida
AT5G15150	ATHB3, HB-3, ATHB-3, HAT7	homeobox 3	0.04	Archaeplastida
AT5G53980	ATHB52, HB52	homeobox protein 52	0.03	Archaeplastida
AT5G66700	ATHB53, HB53, HB-8	homeobox 53	0.03	Archaeplastida
GSVIVT01019655001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
Gb_35116	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Gb_39722	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os02g43330.1	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
LOC_Os03g07450.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os03g08960.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
LOC_Os03g10210.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os04g45810.1	No alias	transcription factor (HD-ZIP I/II)	0.06	Archaeplastida
LOC_Os08g32080.1	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
LOC_Os08g32085.1	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
LOC_Os09g29460.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os10g23090.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os10g26500.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_10428916g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_12866g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_19453g0050	No alias	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.05	Archaeplastida
MA_9241385g0010	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Pp3c11_23440V3.1	No alias	homeobox 1	0.02	Archaeplastida
Pp3c12_21760V3.1	No alias	homeobox protein 16	0.04	Archaeplastida
Pp3c14_21620V3.1	No alias	homeobox protein 6	0.03	Archaeplastida
Pp3c14_21680V3.1	No alias	homeobox 3	0.03	Archaeplastida
Pp3c17_18190V3.1	No alias	homeobox protein 16	0.04	Archaeplastida
Pp3c1_36940V3.1	No alias	homeobox protein 16	0.03	Archaeplastida
Pp3c1_37070V3.1	No alias	homeobox protein 16	0.04	Archaeplastida
Pp3c6_2730V3.1	No alias	Homeobox-leucine zipper protein family	0.03	Archaeplastida
Pp3c7_2100V3.1	No alias	Homeobox-leucine zipper protein family	0.02	Archaeplastida
Pp3c8_440V3.1	No alias	homeobox 3	0.03	Archaeplastida
Smo81609	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Solyc02g085630.3.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc09g008810.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e002803_P001	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Zm00001e012829_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e015274_P001	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Zm00001e034785_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
MF	GO:0033897	ribonuclease T2 activity	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	76	117
IPR001356	Homeobox_dom	24	74

External Links

No external refs found!

Solyc03g082550.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation