1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00024p00180210

AMTR_s00024p00180210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.139

No description available


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00180210
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00228680 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00165130 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00023p00214570 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00044p00183280 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00048p00094230 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00054p00045760 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00060p00126750 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00077p00064360 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00120p00057880 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00184p00039960 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00200p00028910 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s02997p00006970 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!