1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g117820.1.1

Solyc03g117820.1.1


Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG0001266 (Archaeplastida) Phylogenetic Tree(s): OG0001266_tree ,
OG_05_0000955 (LandPlants) Phylogenetic Tree(s): OG_05_0000955_tree ,
OG_06_0004777 (SeedPlants) Phylogenetic Tree(s): OG_06_0004777_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117820.1.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT2G14850 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
GSVIVT01000143001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.06 Archaeplastida
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
LOC_Os12g39090.2 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Pp3c3_34380V3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e040647_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 5 332
No external refs found!