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  5. Solyc03g118340.3.1

Solyc03g118340.3.1


Description : chaperone component ClpC of chloroplast Clp-type protease complex


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002249 (LandPlants) Phylogenetic Tree(s): OG_05_0002249_tree ,
OG_06_0002384 (SeedPlants) Phylogenetic Tree(s): OG_06_0002384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g118340.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008636001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01014062001 No alias External stimuli response.temperature.Hsp... 0.08 Archaeplastida
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Archaeplastida
Smo439163 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Zm00001e013843_P002 No alias organellar chaperone (Clp-p|Clp-m) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 184 235
IPR004176 Clp_N 108 160
IPR003959 ATPase_AAA_core 299 415
IPR019489 Clp_ATPase_C 818 898
IPR003959 ATPase_AAA_core 637 811
No external refs found!