Solyc03g118420.4.1


Description : transcriptional repressor (NF-X1)


Gene families : OG0001605 (Archaeplastida) Phylogenetic Tree(s): OG0001605_tree ,
OG_05_0006304 (LandPlants) Phylogenetic Tree(s): OG_05_0006304_tree ,
OG_06_0008711 (SeedPlants) Phylogenetic Tree(s): OG_06_0008711_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g118420.4.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020537.42 No alias NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os06g14190.1 No alias transcriptional repressor (NF-X1) 0.02 Archaeplastida
Zm00001e030975_P001 No alias transcriptional repressor (NF-X1) 0.06 Archaeplastida
Zm00001e036022_P001 No alias transcriptional repressor (NF-X1) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 325 342
IPR000967 Znf_NFX1 653 668
IPR000967 Znf_NFX1 685 703
IPR000967 Znf_NFX1 447 464
IPR000967 Znf_NFX1 505 516
IPR000967 Znf_NFX1 543 560
IPR000967 Znf_NFX1 389 406
IPR000967 Znf_NFX1 272 287
No external refs found!