Description : DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana (sp|f4hyj7|dexh3_arath : 1607.0)
Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0000862 (LandPlants) Phylogenetic Tree(s): OG_05_0000862_tree ,
OG_06_0000964 (SeedPlants) Phylogenetic Tree(s): OG_06_0000964_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc03g118920.3.1 | |
Cluster | HCCA: Cluster_125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00032p00104970 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
AT1G48650 | No alias | DEA(D/H)-box RNA helicase family protein | 0.08 | Archaeplastida | |
GSVIVT01008365001 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
GSVIVT01034780001 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
Gb_08623 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.06 | Archaeplastida | |
Gb_40990 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
MA_10437209g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.07 | Archaeplastida | |
MA_22839g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.03 | Archaeplastida | |
Pp3c14_12310V3.1 | No alias | RNA helicase family protein | 0.03 | Archaeplastida | |
Pp3c2_32730V3.1 | No alias | DEA(D/H)-box RNA helicase family protein | 0.02 | Archaeplastida | |
Zm00001e017082_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004386 | helicase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002790 | peptide secretion | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
MF | GO:0004645 | phosphorylase activity | IEP | Neighborhood |
CC | GO:0005887 | integral component of plasma membrane | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0008104 | protein localization | IEP | Neighborhood |
MF | GO:0008184 | glycogen phosphorylase activity | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
BP | GO:0009306 | protein secretion | IEP | Neighborhood |
BP | GO:0009314 | response to radiation | IEP | Neighborhood |
BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
BP | GO:0015031 | protein transport | IEP | Neighborhood |
BP | GO:0015833 | peptide transport | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Neighborhood |
BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
BP | GO:0042886 | amide transport | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0043531 | ADP binding | IEP | Neighborhood |
CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
BP | GO:0046903 | secretion | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
No external refs found! |