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  5. Solyc03g119620.1.1

Solyc03g119620.1.1


Description : no hits & (original description: none)


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119620.1.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00104040 evm_27.TU.AmTr_v1... Protein YLS3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.08 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01001181001 No alias No description available 0.03 Archaeplastida
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.04 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02443 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_06428 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os03g57980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g58940.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07860.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_113140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_50191g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_64802g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.03 Archaeplastida
Solyc09g065440.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e007897_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 26 111
No external refs found!