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  5. Solyc03g120840.3.1

Solyc03g120840.3.1


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g120840.3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00223240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 Archaeplastida
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.1 Archaeplastida
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
Gb_08781 No alias transcription factor (DREB) 0.01 Archaeplastida
Gb_25978 No alias Ethylene-responsive transcription factor ABI4... 0.01 Archaeplastida
LOC_Os01g12440.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g52090.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os05g25260.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os05g41780.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os09g20350.1 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_99821g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Solyc02g077840.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc02g093130.3.1 No alias transcription factor (DREB) 0.1 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.02 Archaeplastida
Solyc06g063070.3.1 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e007332_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e019566_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.01 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 72 119
No external refs found!