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  5. Solyc03g121740.3.1

Solyc03g121740.3.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0086097 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121740.3.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00009p00263240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.05 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.05 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.05 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.04 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.02 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.04 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.04 Archaeplastida
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_23308 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g45060.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_10048467g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_175772g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp2g22560.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.03 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc09g011780.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g044680.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018471_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e031496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 109
IPR001005 SANT/Myb 14 61
No external refs found!