Solyc04g007170.3.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g007170.3.1
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00009p00148470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.04	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.02	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.04	Archaeplastida
AT1G12980	ESR1, DRN	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G78080	RAP2.4	related to AP2 4	0.03	Archaeplastida
AT2G25820	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G11140	CRF1	cytokinin response factor 1	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01013920001	No alias	No description available	0.06	Archaeplastida
GSVIVT01016684001	No alias	Ethylene-responsive transcription factor RAP2-12...	0.03	Archaeplastida
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.03	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01026334001	No alias	Ethylene-responsive transcription factor ERF003...	0.07	Archaeplastida
Gb_06377	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_19118	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_41445	No alias	transcription factor (DREB)	0.08	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g54890.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43790.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os07g22770.1	No alias	no description available(sp\|a0a3q7i5y9\|erfc3_sollc : 90.1)	0.03	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os09g39850.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os12g41060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10242823g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10426586g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_10427743g0020	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_10430231g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_10430850g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10436654g0010	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
MA_12171g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_166248g0020	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_18081g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_2040g0010	No alias	transcription factor (DREB)	0.07	Archaeplastida
MA_288689g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
MA_47696g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_55226g0020	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_67585g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_67841g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_7168929g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_7960347g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_896002g0010	No alias	transcription factor (DREB)	0.06	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
Pp3c23_21450V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c27_5180V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c3_13510V3.1	No alias	ethylene responsive element binding factor 2	0.03	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc03g006320.1.1	No alias	transcription factor (ERF)	0.08	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g068830.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e000689_P001	No alias	transcription factor (DREB)	0.08	Archaeplastida
Zm00001e015869_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e030090_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e041781_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	106	156

External Links

No external refs found!

Solyc04g007170.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation