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Description : C3H zinc finger transcription factor. regulatory component ZC11A of TREX/THO mRNP trafficking complex
Gene families : OG0003012 (Archaeplastida) Phylogenetic Tree(s): OG0003012_tree ,
OG_05_0002239 (LandPlants) Phylogenetic Tree(s): OG_05_0002239_tree ,
OG_06_0002393 (SeedPlants) Phylogenetic Tree(s): OG_06_0002393_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g008550.4.1 | |
| Cluster | HCCA: Cluster_212 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G02160 | No alias | CCCH-type zinc finger family protein | 0.04 | Archaeplastida | |
| GSVIVT01010243001 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.04 | Archaeplastida | |
| Gb_02253 | No alias | C3H zinc finger transcription factor. regulatory... | 0.03 | Archaeplastida | |
| Gb_10712 | No alias | C3H zinc finger transcription factor. regulatory... | 0.05 | Archaeplastida | |
| MA_17019g0010 | No alias | C3H zinc finger transcription factor | 0.04 | Archaeplastida | |
| Mp2g02990.1 | No alias | C3H zinc finger transcription factor. regulatory... | 0.06 | Archaeplastida | |
| Smo441325 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.03 | Archaeplastida | |
| Zm00001e023520_P001 | No alias | C3H zinc finger transcription factor. regulatory... | 0.06 | Archaeplastida | |
| Zm00001e041908_P001 | No alias | C3H zinc finger transcription factor. regulatory... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Neighborhood |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006476 | protein deacetylation | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016575 | histone deacetylation | IEP | Neighborhood |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Neighborhood |
| MF | GO:0019902 | phosphatase binding | IEP | Neighborhood |
| MF | GO:0019903 | protein phosphatase binding | IEP | Neighborhood |
| BP | GO:0031399 | regulation of protein modification process | IEP | Neighborhood |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Neighborhood |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0035601 | protein deacylation | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0098732 | macromolecule deacylation | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |