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  5. Solyc04g008590.3.1

Solyc04g008590.3.1


Description : subunit beta of E1 pyruvate dehydrogenase component


Gene families : OG0003571 (Archaeplastida) Phylogenetic Tree(s): OG0003571_tree ,
OG_05_0003181 (LandPlants) Phylogenetic Tree(s): OG_05_0003181_tree ,
OG_06_0003754 (SeedPlants) Phylogenetic Tree(s): OG_06_0003754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008590.3.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00171180 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.04 Archaeplastida
AT1G30120 PDH-E1 BETA pyruvate dehydrogenase E1 beta 0.17 Archaeplastida
AT2G34590 No alias Transketolase family protein 0.06 Archaeplastida
Cre03.g194200 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.06 Archaeplastida
Gb_06066 No alias subunit beta of E1 pyruvate dehydrogenase component 0.07 Archaeplastida
LOC_Os03g44300.1 No alias subunit beta of E1 pyruvate dehydrogenase component 0.05 Archaeplastida
MA_118815g0010 No alias subunit beta of E1 pyruvate dehydrogenase component 0.1 Archaeplastida
Mp6g00740.1 No alias subunit beta of E1 pyruvate dehydrogenase component 0.11 Archaeplastida
Pp3c24_19300V3.1 No alias Transketolase family protein 0.05 Archaeplastida
Pp3c8_21910V3.1 No alias Transketolase family protein 0.03 Archaeplastida
Smo153433 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 Archaeplastida
Zm00001e003250_P002 No alias subunit beta of E1 pyruvate dehydrogenase component 0.17 Archaeplastida
Zm00001e005013_P001 No alias subunit beta of E1 pyruvate dehydrogenase component 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 92 262
IPR033248 Transketolase_C 278 399
No external refs found!