Solyc04g009410.3.1

Description : component beta type-3 of 26S proteasome

Gene families : OG0003815 (Archaeplastida) Phylogenetic Tree(s): OG0003815_tree ,
OG_05_0004658 (LandPlants) Phylogenetic Tree(s): OG_05_0004658_tree ,
OG_06_0004913 (SeedPlants) Phylogenetic Tree(s): OG_06_0004913_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g009410.3.1
Cluster	HCCA: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
AT1G21720	PBC1	proteasome beta subunit C1	0.19	Archaeplastida
AT1G77440	PBC2	20S proteasome beta subunit C2	0.04	Archaeplastida
Cpa\|evm.model.tig00000826.22	No alias	Protein degradation.26S proteasome.20S core...	0.04	Archaeplastida
Cre06.g267500	No alias	Protein degradation.26S proteasome.20S core...	0.18	Archaeplastida
GSVIVT01008836001	No alias	Protein degradation.26S proteasome.20S core...	0.15	Archaeplastida
Gb_09326	No alias	component beta type-3 of 26S proteasome	0.05	Archaeplastida
Gb_29749	No alias	component beta type-3 of 26S proteasome	0.04	Archaeplastida
LOC_Os02g08520.1	No alias	component beta type-3 of 26S proteasome	0.04	Archaeplastida
LOC_Os06g43570.1	No alias	component beta type-3 of 26S proteasome	0.08	Archaeplastida
MA_549126g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_70161g0010	No alias	component beta type-3 of 26S proteasome	0.06	Archaeplastida
Mp7g15370.1	No alias	component beta type-3 of 26S proteasome	0.12	Archaeplastida
Pp3c7_520V3.1	No alias	proteasome beta subunit C1	0.04	Archaeplastida
Smo266913	No alias	Protein degradation.26S proteasome.20S core...	0.03	Archaeplastida
Zm00001e013846_P001	No alias	component beta type-3 of 26S proteasome	0.08	Archaeplastida
Zm00001e030465_P001	No alias	component beta type-3 of 26S proteasome	0.06	Archaeplastida
Zm00001e037487_P001	No alias	component beta type-3 of 26S proteasome	0.16	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
CC	GO:0016272	prefoldin complex	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0019107	myristoyltransferase activity	IEP	Neighborhood
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
CC	GO:0030014	CCR4-NOT complex	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
CC	GO:0072546	ER membrane protein complex	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	7	189

External Links

No external refs found!

Solyc04g009410.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation