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  5. Solyc04g009940.4.1

Solyc04g009940.4.1


Description : no hits & (original description: none)


Gene families : OG0006308 (Archaeplastida) Phylogenetic Tree(s): OG0006308_tree ,
OG_05_0006433 (LandPlants) Phylogenetic Tree(s): OG_05_0006433_tree ,
OG_06_0006654 (SeedPlants) Phylogenetic Tree(s): OG_06_0006654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009940.4.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00038470 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT1G08640 CJD1 Chloroplast J-like domain 1 0.09 Archaeplastida
Cre03.g171100 No alias No description available 0.02 Archaeplastida
GSVIVT01023530001 No alias No description available 0.12 Archaeplastida
Gb_27850 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g03380.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g07970.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Pp3c23_15250V3.1 No alias Chloroplast J-like domain 1 0.04 Archaeplastida
Zm00001e029262_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
CC GO:0009349 riboflavin synthase complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021788 CPP1-like 96 203
No external refs found!