Solyc04g014530.1.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0031698 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g014530.1.1
Cluster	HCCA: Cluster_204

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.02	Archaeplastida
AMTR_s00111p00113030	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00129p00119770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.07	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.03	Archaeplastida
AT5G61600	ERF104	ethylene response factor 104	0.06	Archaeplastida
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013931001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013934001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01033795001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_00125	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_03828	No alias	transcription factor (DREB)	0.06	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24321	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_34285	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41444	No alias	transcription factor (DREB)	0.09	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.03	Archaeplastida
LOC_Os04g48350.1	No alias	Dehydration-responsive element-binding protein 1E...	0.04	Archaeplastida
LOC_Os04g55520.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10242823g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10430850g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10433310g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10434101g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10434489g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_17001g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_201698g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_269802g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_426919g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_426919g0030	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_5280013g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Smo38500	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Solyc04g012050.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	109	159

External Links

No external refs found!

Solyc04g014530.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation